Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015854389.1_cds_XP_016512538.1_25171
CDS Infomation

[gene=LOC107829601] [db_xref=GeneID:107829601] [protein=heparanase-like protein 2] [protein_id=XP_016512538.1] [location=complement(join(1026..1418,2066..2165,2302..2427,2554..2746,3665..3898,3999..4147,4702..4885,5076..5112,5210..5419))] [gbkey=CDS]
Sequence

ATGGACTTCCGAACCTTGTTGTTAATCTTTCTGGCGCTGTGTCCTGCATTTTTGGCGCAA
ACAGGTGAAGATACAGAACTTATGATTGATACATCTGTGAAAATTGCCTGGACAGATGAT
AATTACATTTGTGCTACCCTTGATTGGTGGCCTAAAGAAAAGTGTAACTATAAACAATGT
CCTTGGGACTTGGCATCTATTATAAATCTGGATTTATCTCATCCATTTCTGGAAAATGCT
ATACAAGCTTTCAAGGGTTTGAGATTACGACTCGGAGGTTCATTACAGGACCAAGTAATA
TATGGTGTAGGCAACTTGAAATCTTCTTGCCATCCGTTCACCAAGCAGAGGGATGGGTTG
TTTGGATTCTCTAAGGGATGCTTACATATGCATCGATGGGATGAGTTAAACAACCTTTTC
AAGAAGACAGGAGCACTTGTGACTTTTGGCTTGAATGCGTTGTATGGGAGACGGCGGATC
AATAGGCATGCGTGGGGAGGAAATTGGGATTCCAGCAATGCCCTCGATTTCATAAAATAC
ACTGTTGCCAAGGGCTACCAGATACACTCATGGGAATTTGGAAATGAATTGAGTGGTCAG
GGAATTGGTGCAAGTGTTAATGCTGTACAGTATGGAAAAGATGTTATCCATCTGCACAAT
CTCATAGACCAAGTATACAAGAATTTCGACCAACGTCCTCTTCTATTAGCACCAGGAGGA
TTCTATAGTCCTGAGTGGTTCAGCAAGCTCCTTGAGGTTTCAGGGCCTGGCATAGTCAAT
GTCTTGACGCATCATATTTATAATCTTGGCCCAGGGTCTGAAGGAAGCAAGCTTGTAGAT
AAAGTTTTAAATCCTCAATACCTGAATAAAATATCAGACACATTTGGTAATCTTACTCAA
ACCATAAAAATGAAGGGTCCTTGGGCTTCAGCTTGGGTTGGAGAATCTGGTGGAGCCTAC
AACAGTGGAGGTCCTAATGTGTCTAACGCCTTCGTAGATAGCTTTTGGTATTTAGATCAG
CTTGGCATGGCGGCGAAGCACCATACTAAAGTATACTGCCGGCAGACTCTTATTGGTGGA
AATTATGGGCTCCTTGATACCAGCACGTTTGTTCCAAATCCTGATTATTATAGTGCACTT
CTTTGGCATAGACTGATGGGAAAAGAAGTTCTTGATGTTAGCAGCAACGCCTCACCATAT
TTGCGCTCTTATGCCCATTGTACAAAAGATAGAGCAGGTGTGACTTTACTTCTGATCAAT
TTAAGCAACCAGATTCAGTATGGGGTCAACATCCAATCCAGTGCATATACCAGCTTGCAA
GTCGGTGAGAAAAAAAATCACAAGAAAAATGCATTCGTGCACGGTCTTAAAGAAACTGTT
TCGTGGGTAGGAAGCAAATCATCAGATGTTACATTATATCGAGAAGAGTATCATCTAACT
CCAGAAGGCGGCGACCTTCAGAGTAGAACTATGCTCCTCAACGGGAAACCATTACAACTC
ACAGAAACAGGAGACATTCCAAGTTTGACTCCAGTTCTTAAAAATATTGAATCTCCGATA
TCAGTTGCACCATTGTCCATCAAGTTCATTGTATTCCCCAACTTCAATTCTCCCAGTTGT
AGATAA

Peptide Sequence

PEP ID

XP_016512538.1
PEP Infomation

PREDICTED: heparanase-like protein 2 [Nicotiana tabacum]
Sequence

MDFRTLLLIFLALCPAFLAQTGEDTELMIDTSVKIAWTDDNYICATLDWWPKEKCNYKQC
PWDLASIINLDLSHPFLENAIQAFKGLRLRLGGSLQDQVIYGVGNLKSSCHPFTKQRDGL
FGFSKGCLHMHRWDELNNLFKKTGALVTFGLNALYGRRRINRHAWGGNWDSSNALDFIKY
TVAKGYQIHSWEFGNELSGQGIGASVNAVQYGKDVIHLHNLIDQVYKNFDQRPLLLAPGG
FYSPEWFSKLLEVSGPGIVNVLTHHIYNLGPGSEGSKLVDKVLNPQYLNKISDTFGNLTQ
TIKMKGPWASAWVGESGGAYNSGGPNVSNAFVDSFWYLDQLGMAAKHHTKVYCRQTLIGG
NYGLLDTSTFVPNPDYYSALLWHRLMGKEVLDVSSNASPYLRSYAHCTKDRAGVTLLLIN
LSNQIQYGVNIQSSAYTSLQVGEKKNHKKNAFVHGLKETVSWVGSKSSDVTLYREEYHLT
PEGGDLQSRTMLLNGKPLQLTETGDIPSLTPVLKNIESPISVAPLSIKFIVFPNFNSPSC
R

Transcript Sequence

Gene sequence data has not been registered.